J3_9QWT_009

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAG*CG(PSU)AG*UCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|1359
9QWT|1|A2|A|1360
9QWT|1|A2|G|1361
*
9QWT|1|A2|C|1393
9QWT|1|A2|G|1394
9QWT|1|A2|PSU|1395
9QWT|1|A2|A|1396
9QWT|1|A2|G|1397
*
9QWT|1|A2|U|1422
9QWT|1|A2|C|1423
9QWT|1|A2|C|1424
9QWT|1|A2|G|1425

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D2

Large ribosomal subunit protein uL2

Chain L2

Large ribosomal subunit protein eL19

Chain j2

Large ribosomal subunit protein eL43