J3_9QWT_014

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGGUC*GGAGU*AA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|U|2195
9QWT|1|A2|C|2196
9QWT|1|A2|G|2197
9QWT|1|A2|G|2198
9QWT|1|A2|U|2199
9QWT|1|A2|C|2200
*
9QWT|1|A2|G|2270
9QWT|1|A2|G|2271
9QWT|1|A2|A|2272
9QWT|1|A2|G|2273
9QWT|1|A2|U|2274
*
9QWT|1|A2|A|2291
9QWT|1|A2|A|2292

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain R2

Large ribosomal subunit protein uL23

Chain a2

Large ribosomal subunit protein eL34

Chain e2

Large ribosomal subunit protein eL38

Chain f2

Large ribosomal subunit protein eL39