J3_9QWT_016

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9QWT|1|A2|U|2518

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|A|2306
9QWT|1|A2|G|2307
9QWT|1|A2|A|2308
9QWT|1|A2|U|2309
9QWT|1|A2|G|2310
*
9QWT|1|A2|C|2327
9QWT|1|A2|A|2328
9QWT|1|A2|G|2329
9QWT|1|A2|U|2330
*
9QWT|1|A2|A|2512
9QWT|1|A2|G|2513
9QWT|1|A2|G|2514
9QWT|1|A2|G|2515
9QWT|1|A2|U|2516
9QWT|1|A2|G|2517
9QWT|1|A2|U|2518
9QWT|1|A2|A|2519
9QWT|1|A2|A|2520
9QWT|1|A2|A|2521
9QWT|1|A2|U|2522

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain T2

Large ribosomal subunit protein eL27