J3_9QWT_023

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

9QWT|1|A2|A|4116, 9QWT|1|A2|U|4117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|U|4115
9QWT|1|A2|A|4116
9QWT|1|A2|U|4117
9QWT|1|A2|C|4118
*
9QWT|1|A2|G|4143
9QWT|1|A2|U|4144
9QWT|1|A2|U|4145
*
9QWT|1|A2|A|4159
9QWT|1|A2|C|4160
9QWT|1|A2|U|4161
9QWT|1|A2|A|4162
9QWT|1|A2|A|4163
9QWT|1|A2|U|4164
9QWT|1|A2|A|4165

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain E2

Large ribosomal subunit protein uL3

Chain I2

Large ribosomal subunit protein uL13

Chain P2

Large ribosomal subunit protein uL14