J3_9QWT_025

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

9QWT|1|A2|U|4635, 9QWT|1|A2|C|4636, 9QWT|1|A2|A|4707

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|4616
9QWT|1|A2|A|4617
9QWT|1|A2|U|4618
9QWT|1|A2|U|4619
9QWT|1|A2|C|4620
9QWT|1|A2|G|4621
*
9QWT|1|A2|C|4629
9QWT|1|A2|C|4630
9QWT|1|A2|U|4631
9QWT|1|A2|G|4632
9QWT|1|A2|C|4633
9QWT|1|A2|U|4634
9QWT|1|A2|U|4635
9QWT|1|A2|C|4636
9QWT|1|A2|U|4637
*
9QWT|1|A2|A|4706
9QWT|1|A2|A|4707
9QWT|1|A2|G|4708
9QWT|1|A2|G|4709

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain E2

Large ribosomal subunit protein uL3

Chain J2

Large ribosomal subunit protein uL22

Chain X2

Large ribosomal subunit protein eL31