J3_9QWT_027
3D structure
- PDB id
- 9QWT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUAG*CAGGGGAUUGAAAAUCCCCGUGCCC*GU
- Length
- 31 nucleotides
- Bulged bases
- 9QWT|1|Bv|U|8, 9QWT|1|Bv|A|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QWT|1|Bv|A|7
9QWT|1|Bv|U|8
9QWT|1|Bv|A|9
9QWT|1|Bv|G|10
*
9QWT|1|Bv|C|25
9QWT|1|Bv|A|26
9QWT|1|Bv|G|27
9QWT|1|Bv|G|28
9QWT|1|Bv|G|29
9QWT|1|Bv|G|30
9QWT|1|Bv|A|31
9QWT|1|Bv|U|32
9QWT|1|Bv|U|33
9QWT|1|Bv|G|34
9QWT|1|Bv|A|35
9QWT|1|Bv|A|36
9QWT|1|Bv|A|37
9QWT|1|Bv|A|38
9QWT|1|Bv|U|39
9QWT|1|Bv|C|40
9QWT|1|Bv|C|41
9QWT|1|Bv|C|42
9QWT|1|Bv|C|43
9QWT|1|Bv|G|44
9QWT|1|Bv|U|45
9QWT|1|Bv|G|46
9QWT|1|Bv|C|47
9QWT|1|Bv|C|48
9QWT|1|Bv|C|49
*
9QWT|1|Bv|G|65
9QWT|1|Bv|U|66
Current chains
- Chain Bv
- transfer RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bx
- messenger RNA
- Chain D1
- Large ribosomal subunit protein uL16
- Chain E3
- Small ribosomal subunit protein uS12
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: