J3_9QWT_036

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCAG*CCAGUAA*UGAUU(A2M)AG

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|m2|C|1220
9QWT|1|m2|C|1221
9QWT|1|m2|A|1222
9QWT|1|m2|G|1223
*
9QWT|1|m2|C|1647
9QWT|1|m2|C|1648
9QWT|1|m2|A|1649
9QWT|1|m2|G|1650
9QWT|1|m2|U|1651
9QWT|1|m2|A|1652
9QWT|1|m2|A|1653
*
9QWT|1|m2|U|1675
9QWT|1|m2|G|1676
9QWT|1|m2|A|1677
9QWT|1|m2|U|1678
9QWT|1|m2|U|1679
9QWT|1|m2|A2M|1680
9QWT|1|m2|A|1681
9QWT|1|m2|G|1682

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain G3

Small ribosomal subunit protein eS28

Chain s2

Small ribosomal subunit protein uS7

Chain y2

Small ribosomal subunit protein uS9