J3_9QWT_041

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UG*UGUC*GAUAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|m2|U|1352
9QWT|1|m2|G|1353
*
9QWT|1|m2|U|1362
9QWT|1|m2|G|1363
9QWT|1|m2|U|1364
9QWT|1|m2|C|1365
*
9QWT|1|m2|G|1377
9QWT|1|m2|A|1378
9QWT|1|m2|U|1379
9QWT|1|m2|A|1380
9QWT|1|m2|A|1381

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain J3

Small ribosomal subunit protein uS5

Chain o2

Small ribosomal subunit protein uS2

Chain z2

Small ribosomal subunit protein eS17