J3_9QZP_001

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

9QZP|1|A2|C|159

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|112
9QZP|1|A2|A|113
9QZP|1|A2|G|114
9QZP|1|A2|C|115
9QZP|1|A2|G|116
*
9QZP|1|A2|C|155
9QZP|1|A2|G|156
9QZP|1|A2|U|157
9QZP|1|A2|A|158
9QZP|1|A2|C|159
9QZP|1|A2|G|160
*
9QZP|1|A2|C|275
9QZP|1|A2|C|276
9QZP|1|A2|G|277
9QZP|1|A2|G|278

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein eL8

Chain F1

Large ribosomal subunit protein eL13

Chain H1

Large ribosomal subunit protein eL15

Chain b2

Large ribosomal subunit protein uL29

Chain c2

Large ribosomal subunit protein eL36