J3_9QZP_002

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9QZP|1|A2|C|216, 9QZP|1|A2|C|217, 9QZP|1|A2|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|196
9QZP|1|A2|A|197
9QZP|1|A2|A|198
9QZP|1|A2|G|199
*
9QZP|1|A2|C|215
9QZP|1|A2|C|216
9QZP|1|A2|C|217
9QZP|1|A2|A|218
9QZP|1|A2|G|219
9QZP|1|A2|C|220
9QZP|1|A2|C|221
9QZP|1|A2|C|222
9QZP|1|A2|G|223
9QZP|1|A2|U|224
9QZP|1|A2|G|225
9QZP|1|A2|G|226
9QZP|1|A2|A|227
9QZP|1|A2|C|228
*
9QZP|1|A2|G|240
9QZP|1|A2|G|241
9QZP|1|A2|U|242
9QZP|1|A2|A|243
9QZP|1|A2|G|244

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain S2

Large ribosomal subunit protein uL24