J3_9QZP_007

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CC*GAGGAAGACCGUCGCCG*CACGGGG

Length

26 nucleotides

Bulged bases

9QZP|1|A2|A|857, 9QZP|1|A2|A|866, 9QZP|1|A2|U|871, 9QZP|1|A2|C|1094

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|719
9QZP|1|A2|C|720
*
9QZP|1|A2|G|853
9QZP|1|A2|A|854
9QZP|1|A2|G|855
9QZP|1|A2|G|856
9QZP|1|A2|A|857
9QZP|1|A2|A|858
9QZP|1|A2|G|859
9QZP|1|A2|A|866
9QZP|1|A2|C|868
9QZP|1|A2|C|869
9QZP|1|A2|G|870
9QZP|1|A2|U|871
9QZP|1|A2|C|872
9QZP|1|A2|G|873
9QZP|1|A2|C|874
9QZP|1|A2|C|875
9QZP|1|A2|G|876
*
9QZP|1|A2|C|1092
9QZP|1|A2|A|1093
9QZP|1|A2|C|1094
9QZP|1|A2|G|1095
9QZP|1|A2|G|1096
9QZP|1|A2|G|1097
9QZP|1|A2|G|1098

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A1

Large ribosomal subunit protein uL30

Chain F2

Large ribosomal subunit protein uL4

Chain H2

Large ribosomal subunit protein eL6

Chain Y2

Large ribosomal subunit protein eL32