J3_9QZP_016

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9QZP|1|A2|U|2518

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|A|2306
9QZP|1|A2|G|2307
9QZP|1|A2|A|2308
9QZP|1|A2|U|2309
9QZP|1|A2|G|2310
*
9QZP|1|A2|C|2327
9QZP|1|A2|A|2328
9QZP|1|A2|G|2329
9QZP|1|A2|U|2330
*
9QZP|1|A2|A|2512
9QZP|1|A2|G|2513
9QZP|1|A2|G|2514
9QZP|1|A2|G|2515
9QZP|1|A2|U|2516
9QZP|1|A2|G|2517
9QZP|1|A2|U|2518
9QZP|1|A2|A|2519
9QZP|1|A2|A|2520
9QZP|1|A2|A|2521
9QZP|1|A2|U|2522

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain T2

Large ribosomal subunit protein eL27