J3_9QZP_019

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUG*CGGGAGUAACUA(PSU)GACUCUCUUAAGGUAG*UGAA(OMU)G

Length

38 nucleotides

Bulged bases

9QZP|1|A2|U|3428, 9QZP|1|A2|OMU|3474

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|3352
9QZP|1|A2|U|3353
9QZP|1|A2|G|3354
*
9QZP|1|A2|C|3408
9QZP|1|A2|G|3409
9QZP|1|A2|G|3410
9QZP|1|A2|G|3411
9QZP|1|A2|A|3412
9QZP|1|A2|G|3413
9QZP|1|A2|U|3414
9QZP|1|A2|A|3415
9QZP|1|A2|A|3416
9QZP|1|A2|C|3417
9QZP|1|A2|U|3418
9QZP|1|A2|A|3419
9QZP|1|A2|PSU|3420
9QZP|1|A2|G|3421
9QZP|1|A2|A|3422
9QZP|1|A2|C|3423
9QZP|1|A2|U|3424
9QZP|1|A2|C|3425
9QZP|1|A2|U|3426
9QZP|1|A2|C|3427
9QZP|1|A2|U|3428
9QZP|1|A2|U|3429
9QZP|1|A2|A|3430
9QZP|1|A2|A|3431
9QZP|1|A2|G|3432
9QZP|1|A2|G|3433
9QZP|1|A2|U|3434
9QZP|1|A2|A|3435
9QZP|1|A2|G|3436
*
9QZP|1|A2|U|3470
9QZP|1|A2|G|3471
9QZP|1|A2|A|3472
9QZP|1|A2|A|3473
9QZP|1|A2|OMU|3474
9QZP|1|A2|G|3475

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Bv

Transfer RNA; tRNA

Chain Bz

Transfer RNA; tRNA

Chain D2

Large ribosomal subunit protein uL2

Chain h2

60S ribosomal protein L41

Chain m2

Small subunit ribosomal RNA; SSU rRNA

Chain x2

Small ribosomal subunit protein uS19