J3_9QZP_022

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

(OMG)UC*GCCUCACGAUCC*(OMG)GUGUC

Length

21 nucleotides

Bulged bases

9QZP|1|A2|C|3989, 9QZP|1|A2|U|4026

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|OMG|3880
9QZP|1|A2|U|3881
9QZP|1|A2|C|3882
*
9QZP|1|A2|G|3983
9QZP|1|A2|C|3984
9QZP|1|A2|C|3985
9QZP|1|A2|U|3986
9QZP|1|A2|C|3987
9QZP|1|A2|A|3988
9QZP|1|A2|C|3989
9QZP|1|A2|G|3990
9QZP|1|A2|A|3991
9QZP|1|A2|U|3992
9QZP|1|A2|C|3993
9QZP|1|A2|C|3994
*
9QZP|1|A2|OMG|4022
9QZP|1|A2|G|4023
9QZP|1|A2|U|4024
9QZP|1|A2|G|4025
9QZP|1|A2|U|4026
9QZP|1|A2|C|4027

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain K2

Large ribosomal subunit protein eL18

Chain N2

Large ribosomal subunit protein eL21

Chain U2

Large ribosomal subunit protein uL15

Chain i2

Large ribosomal subunit protein eL42

Chain n2

Transfer RNA; tRNA