J3_9QZP_025

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GUUG*CGUUC*GUUGACGCACGUUC

Length

23 nucleotides

Bulged bases

9QZP|1|A2|U|4527, 9QZP|1|A2|G|4584, 9QZP|1|A2|C|4586, 9QZP|1|A2|A|4589, 9QZP|1|A2|C|4590

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|G|4403
9QZP|1|A2|U|4404
9QZP|1|A2|U|4405
9QZP|1|A2|G|4406
*
9QZP|1|A2|C|4524
9QZP|1|A2|G|4525
9QZP|1|A2|U|4526
9QZP|1|A2|U|4527
9QZP|1|A2|C|4528
*
9QZP|1|A2|G|4581
9QZP|1|A2|U|4582
9QZP|1|A2|U|4583
9QZP|1|A2|G|4584
9QZP|1|A2|A|4585
9QZP|1|A2|C|4586
9QZP|1|A2|G|4587
9QZP|1|A2|C|4588
9QZP|1|A2|A|4589
9QZP|1|A2|C|4590
9QZP|1|A2|G|4591
9QZP|1|A2|U|4592
9QZP|1|A2|U|4593
9QZP|1|A2|C|4594

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain G1

Large ribosomal subunit protein eL14

Chain H2

Large ribosomal subunit protein eL6

Chain I2

Large ribosomal subunit protein uL13

Chain Z2

Large ribosomal subunit protein eL33