J3_9QZP_026

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

9QZP|1|A2|U|4635, 9QZP|1|A2|C|4636, 9QZP|1|A2|A|4707

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|4616
9QZP|1|A2|A|4617
9QZP|1|A2|U|4618
*
9QZP|1|A2|G|4632
9QZP|1|A2|C|4633
9QZP|1|A2|U|4634
9QZP|1|A2|U|4635
9QZP|1|A2|C|4636
9QZP|1|A2|U|4637
*
9QZP|1|A2|A|4706
9QZP|1|A2|A|4707
9QZP|1|A2|G|4708
9QZP|1|A2|G|4709

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain E2

Large ribosomal subunit protein uL3

Chain J2

Large ribosomal subunit protein uL22

Chain X2

Large ribosomal subunit protein eL31