J3_9QZP_028

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AC*GAGAAUU*ACACU

Length

14 nucleotides

Bulged bases

9QZP|1|C2|A|62

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|C2|A|44
9QZP|1|C2|C|45
*
9QZP|1|C2|G|58
9QZP|1|C2|A|59
9QZP|1|C2|G|60
9QZP|1|C2|A|61
9QZP|1|C2|A|62
9QZP|1|C2|U|63
9QZP|1|C2|U|64
*
9QZP|1|C2|A|95
9QZP|1|C2|C|96
9QZP|1|C2|A|97
9QZP|1|C2|C|98
9QZP|1|C2|U|99

Current chains

Chain C2

5.8S ribosomal RNA

Nearby chains

Chain R2

Large ribosomal subunit protein uL23

Chain b2

Large ribosomal subunit protein uL29

Chain d2

Large ribosomal subunit protein eL37

Chain f2

Large ribosomal subunit protein eL39