J3_9QZP_032
3D structure
- PDB id
- 9QZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome Classical Pre translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- AUCUUU*AU(OMG)GAAUAGG*CAUGAU
- Length
- 22 nucleotides
- Bulged bases
- 9QZP|1|m2|C|689, 9QZP|1|m2|U|690, 9QZP|1|m2|U|873, 9QZP|1|m2|G|875, 9QZP|1|m2|A|915
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QZP|1|m2|A|687
9QZP|1|m2|U|688
9QZP|1|m2|C|689
9QZP|1|m2|U|690
9QZP|1|m2|U|801
9QZP|1|m2|U|802
*
9QZP|1|m2|A|867
9QZP|1|m2|U|868
9QZP|1|m2|OMG|869
9QZP|1|m2|G|870
9QZP|1|m2|A|871
9QZP|1|m2|A|872
9QZP|1|m2|U|873
9QZP|1|m2|A|874
9QZP|1|m2|G|875
9QZP|1|m2|G|876
*
9QZP|1|m2|C|914
9QZP|1|m2|A|915
9QZP|1|m2|U|916
9QZP|1|m2|G|917
9QZP|1|m2|A|918
9QZP|1|m2|U|919
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain E3
- Small ribosomal subunit protein uS12
- Chain L2
- Large ribosomal subunit protein eL19
- Chain N3
- Small ribosomal subunit protein uS15
- Chain P3
- Small ribosomal subunit protein uS8
- Chain t2
- Small ribosomal subunit protein eS7
- Chain w2
- Small ribosomal subunit protein uS17
Coloring options: