3D structure

PDB id
9QZP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome Classical Pre translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
AGAG*CAG*CUGGAU
Length
13 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QZP|1|m2|A|818
9QZP|1|m2|G|819
9QZP|1|m2|A|820
9QZP|1|m2|G|821
*
9QZP|1|m2|C|831
9QZP|1|m2|A|832
9QZP|1|m2|G|833
*
9QZP|1|m2|C|845
9QZP|1|m2|U|846
9QZP|1|m2|G|847
9QZP|1|m2|G|848
9QZP|1|m2|A|849
9QZP|1|m2|U|850

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain L3
Small ribosomal subunit protein uS4
Chain Q3
Small ribosomal subunit protein eS24
Chain r2
Small ribosomal subunit protein eS4

Coloring options:

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