J3_9QZP_039

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CCGGAC*GGGUG*UUAGAUG

Length

18 nucleotides

Bulged bases

9QZP|1|m2|G|1276, 9QZP|1|m2|G|1509, 9QZP|1|m2|U|1511

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|m2|C|1274
9QZP|1|m2|C|1275
9QZP|1|m2|G|1276
9QZP|1|m2|G|1277
9QZP|1|m2|A|1278
9QZP|1|m2|C|1279
*
9QZP|1|m2|G|1322
9QZP|1|m2|G|1323
9QZP|1|m2|G|1324
9QZP|1|m2|U|1325
9QZP|1|m2|G|1326
*
9QZP|1|m2|U|1506
9QZP|1|m2|U|1507
9QZP|1|m2|A|1508
9QZP|1|m2|G|1509
9QZP|1|m2|A|1510
9QZP|1|m2|U|1511
9QZP|1|m2|G|1512

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain H3

Small ribosomal subunit protein uS14

Chain M3

Small ribosomal subunit protein eS12

Chain v2

Small ribosomal subunit protein eS10