J3_9R9P_024
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGA*UAAUA*UA
- Length
- 10 nucleotides
- Bulged bases
- 9R9P|1|C2|U|864
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9P|1|C2|U|633
9R9P|1|C2|G|634
9R9P|1|C2|A|635
*
9R9P|1|C2|U|861
9R9P|1|C2|A|862
9R9P|1|C2|A|863
9R9P|1|C2|U|864
9R9P|1|C2|A|865
*
9R9P|1|C2|U|965
9R9P|1|C2|A|966
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain SH
- 40S ribosomal protein S7-A
- Chain SL
- 40S ribosomal protein S11-A
- Chain SN
- 40S ribosomal protein S13
- Chain SW
- 40S ribosomal protein S22-A
- Chain SX
- 40S ribosomal protein S23-A
- Chain Sb
- 40S ribosomal protein S27-A
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