J3_9R9P_031
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAAUUU*GGGGAAACUCAC*GGCCG
- Length
- 25 nucleotides
- Bulged bases
- 9R9P|1|C2|G|1199, 9R9P|1|C2|G|1201, 9R9P|1|C2|A|1203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9P|1|C2|C|1180
9R9P|1|C2|U|1181
9R9P|1|C2|U|1182
9R9P|1|C2|A|1183
9R9P|1|C2|A|1184
9R9P|1|C2|U|1185
9R9P|1|C2|U|1186
9R9P|1|C2|U|1187
*
9R9P|1|C2|G|1198
9R9P|1|C2|G|1199
9R9P|1|C2|G|1200
9R9P|1|C2|G|1201
9R9P|1|C2|A|1202
9R9P|1|C2|A|1203
9R9P|1|C2|A|1204
9R9P|1|C2|C|1205
9R9P|1|C2|U|1206
9R9P|1|C2|C|1207
9R9P|1|C2|A|1208
9R9P|1|C2|C|1209
*
9R9P|1|C2|G|1454
9R9P|1|C2|G|1455
9R9P|1|C2|C|1456
9R9P|1|C2|C|1457
9R9P|1|C2|G|1458
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain SP
- 40S ribosomal protein S15
- Chain SS
- 40S ribosomal protein S18-A
- Chain SU
- Small ribosomal subunit protein uS10
- Chain Sd
- Small ribosomal subunit protein uS14A
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