J3_9R9P_038
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AC*GAUACGU*AAUCU
- Length
- 14 nucleotides
- Bulged bases
- 9R9P|1|C3|U|60, 9R9P|1|C3|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9P|1|C3|A|44
9R9P|1|C3|C|45
*
9R9P|1|C3|G|58
9R9P|1|C3|A|59
9R9P|1|C3|U|60
9R9P|1|C3|A|61
9R9P|1|C3|C|62
9R9P|1|C3|G|63
9R9P|1|C3|U|64
*
9R9P|1|C3|A|96
9R9P|1|C3|A|97
9R9P|1|C3|U|98
9R9P|1|C3|C|99
9R9P|1|C3|U|100
Current chains
- Chain C3
- 5.8S ribosomal RNA
Nearby chains
- Chain LX
- 60S ribosomal protein L25
- Chain Lh
- 60S ribosomal protein L35-A
- Chain Lj
- 60S ribosomal protein L37-A
- Chain Ll
- 60S ribosomal protein L39
Coloring options: