3D structure

PDB id
9RBF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.44 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
9RBF|1|a|U|2334, 9RBF|1|a|A|2336
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RBF|1|a|C|2295
9RBF|1|a|U|2296
9RBF|1|a|A|2297
9RBF|1|a|A|2298
9RBF|1|a|U|2299
*
9RBF|1|a|A|2317
9RBF|1|a|G|2318
9RBF|1|a|G|2319
9RBF|1|a|U|2320
9RBF|1|a|U|2321
9RBF|1|a|A|2322
9RBF|1|a|G|2323
*
9RBF|1|a|C|2332
9RBF|1|a|A|2333
9RBF|1|a|U|2334
9RBF|1|a|A|2335
9RBF|1|a|A|2336
9RBF|1|a|G|2337

Current chains

Chain a
23S rRNA

Nearby chains

Chain Z
Transfer RNA; tRNA
Chain b
5S ribosomal RNA; 5S rRNA
Chain f
Large ribosomal subunit protein uL5
Chain n
Large ribosomal subunit protein uL18
Chain v
Large ribosomal subunit protein bL27

Coloring options:

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