J3_9RG7_002

3D structure

PDB id

9RG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro reconstituted NAA40-NAC bound 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9RG7|1|L5|G|219, 9RG7|1|L5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RG7|1|L5|C|196
9RG7|1|L5|A|197
9RG7|1|L5|A|198
9RG7|1|L5|G|199
*
9RG7|1|L5|C|215
9RG7|1|L5|C|216
9RG7|1|L5|C|217
9RG7|1|L5|A|218
9RG7|1|L5|G|219
9RG7|1|L5|C|220
9RG7|1|L5|C|221
9RG7|1|L5|C|222
9RG7|1|L5|G|223
9RG7|1|L5|U|224
9RG7|1|L5|G|225
9RG7|1|L5|G|226
9RG7|1|L5|A|227
9RG7|1|L5|C|228
*
9RG7|1|L5|G|240
9RG7|1|L5|G|241
9RG7|1|L5|U|242
9RG7|1|L5|A|243
9RG7|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26