3D structure

PDB id
9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In vitro reconstituted NAA40-NAC bound 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
UGGA*UUAAGAG*CAUUA
Length
16 nucleotides
Bulged bases
9RG7|1|S2|G|921
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RG7|1|S2|U|682
9RG7|1|S2|G|683
9RG7|1|S2|G|684
9RG7|1|S2|A|685
*
9RG7|1|S2|U|917
9RG7|1|S2|U|918
9RG7|1|S2|A|919
9RG7|1|S2|A|920
9RG7|1|S2|G|921
9RG7|1|S2|A|922
9RG7|1|S2|G|923
*
9RG7|1|S2|C|1019
9RG7|1|S2|A|1020
9RG7|1|S2|U|1021
9RG7|1|S2|U|1022
9RG7|1|S2|A|1023

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SH
40S ribosomal protein S7
Chain SL
40S ribosomal protein S11
Chain SN
40S ribosomal protein S13
Chain SW
40S ribosomal protein S15a
Chain SX
40S ribosomal protein S23
Chain Sb
40S ribosomal protein S27

Coloring options:

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