J3_9ROT_005
3D structure
- PDB id
- 9ROT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UUCUGUAAUC*GAUCAACCUCAC*GCAAGAAA
- Length
- 30 nucleotides
- Bulged bases
- 9ROT|1|A|U|1229, 9ROT|1|A|C|1230, 9ROT|1|A|A|1231, 9ROT|1|A|A|1353
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ROT|1|A|U|1207
9ROT|1|A|U|1208
9ROT|1|A|C|1209
9ROT|1|A|U|1210
9ROT|1|A|G|1211
9ROT|1|A|U|1212
9ROT|1|A|A|1213
9ROT|1|A|A|1214
9ROT|1|A|U|1215
9ROT|1|A|C|1216
*
9ROT|1|A|G|1227
9ROT|1|A|A|1228
9ROT|1|A|U|1229
9ROT|1|A|C|1230
9ROT|1|A|A|1231
9ROT|1|A|A|1232
9ROT|1|A|C|1233
9ROT|1|A|C|1234
9ROT|1|A|U|1235
9ROT|1|A|C|1236
9ROT|1|A|A|1237
9ROT|1|A|C|1238
*
9ROT|1|A|G|1351
9ROT|1|A|C|1352
9ROT|1|A|A|1353
9ROT|1|A|A|1354
9ROT|1|A|G|1355
9ROT|1|A|A|1356
9ROT|1|A|A|1357
9ROT|1|A|A|1358
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
Coloring options: