J3_9ROT_006
3D structure
- PDB id
- 9ROT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CUUCAG*CGCAAGU*AAAGACG
- Length
- 20 nucleotides
- Bulged bases
- 9ROT|1|A|U|1270
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ROT|1|A|C|1268
9ROT|1|A|U|1269
9ROT|1|A|U|1270
9ROT|1|A|C|1271
9ROT|1|A|A|1272
9ROT|1|A|G|1273
*
9ROT|1|A|C|1302
9ROT|1|A|G|1303
9ROT|1|A|C|1304
9ROT|1|A|A|1305
9ROT|1|A|A|1306
9ROT|1|A|G|1307
9ROT|1|A|U|1308
*
9ROT|1|A|A|1317
9ROT|1|A|A|1318
9ROT|1|A|A|1319
9ROT|1|A|G|1320
9ROT|1|A|A|1321
9ROT|1|A|C|1322
9ROT|1|A|G|1323
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 1
- 28S ribosomal protein S35, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
Coloring options: