3D structure

PDB id
9ROV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GAUU*AUUAACCU*AGC
Length
15 nucleotides
Bulged bases
9ROV|1|A|C|828
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROV|1|A|G|687
9ROV|1|A|A|688
9ROV|1|A|U|689
9ROV|1|A|U|690
*
9ROV|1|A|A|823
9ROV|1|A|U|824
9ROV|1|A|U|825
9ROV|1|A|A|826
9ROV|1|A|A|827
9ROV|1|A|C|828
9ROV|1|A|C|829
9ROV|1|A|U|830
*
9ROV|1|A|A|856
9ROV|1|A|G|857
9ROV|1|A|C|858

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain J
28S ribosomal protein S12, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain T
28S ribosomal protein S25, mitochondrial

Coloring options:

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