J3_9RPF_006
3D structure
- PDB id
- 9RPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UGUAAUC*GAUCAACCUCAC*GCAA
- Length
- 23 nucleotides
- Bulged bases
- 9RPF|1|A|U|1229, 9RPF|1|A|C|1230, 9RPF|1|A|A|1232
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPF|1|A|U|1210
9RPF|1|A|G|1211
9RPF|1|A|U|1212
9RPF|1|A|A|1213
9RPF|1|A|A|1214
9RPF|1|A|U|1215
9RPF|1|A|C|1216
*
9RPF|1|A|G|1227
9RPF|1|A|A|1228
9RPF|1|A|U|1229
9RPF|1|A|C|1230
9RPF|1|A|A|1231
9RPF|1|A|A|1232
9RPF|1|A|C|1233
9RPF|1|A|C|1234
9RPF|1|A|U|1235
9RPF|1|A|C|1236
9RPF|1|A|A|1237
9RPF|1|A|C|1238
*
9RPF|1|A|G|1351
9RPF|1|A|C|1352
9RPF|1|A|A|1353
9RPF|1|A|A|1354
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain H
- 28S ribosomal protein S10, mitochondrial
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain b
- 12S rRNA N4-methylcytidine (m4C) methyltransferase
Coloring options: