J3_9RPV_046
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 9RPV|1|M5|G|4115, 9RPV|1|M5|C|4116, 9RPV|1|M5|U|4117, 9RPV|1|M5|U|4118, 9RPV|1|M5|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|M5|G|4091
9RPV|1|M5|G|4092
9RPV|1|M5|G|4093
9RPV|1|M5|G|4094
*
9RPV|1|M5|C|4114
9RPV|1|M5|G|4115
9RPV|1|M5|C|4116
9RPV|1|M5|U|4117
9RPV|1|M5|U|4118
9RPV|1|M5|C|4119
9RPV|1|M5|U|4120
9RPV|1|M5|G|4121
9RPV|1|M5|G|4122
9RPV|1|M5|C|4123
9RPV|1|M5|G|4124
9RPV|1|M5|C|4125
9RPV|1|M5|C|4126
9RPV|1|M5|A|4127
9RPV|1|M5|A|4128
9RPV|1|M5|G|4129
*
9RPV|1|M5|C|4155
9RPV|1|M5|G|4156
9RPV|1|M5|A|4157
9RPV|1|M5|C|4158
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
Nearby chains
- Chain MA
- Large ribosomal subunit protein uL2
- Chain MG
- 60S ribosomal protein L7a
- Chain MX
- 60S ribosomal protein L23a
- Chain MZ
- 60S ribosomal protein L27
- Chain Mc
- 60S ribosomal protein L30
- Chain Mg
- 60S ribosomal protein L34
- Chain Mp
- 60S ribosomal protein L37a
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
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