J3_9RPV_064

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|U|1225
9RPV|1|S2|G|1226
9RPV|1|S2|G|1227
9RPV|1|S2|A|1228
*
9RPV|1|S2|U|1530
9RPV|1|S2|A|1531
9RPV|1|S2|C|1532
*
9RPV|1|S2|G|1638
9RPV|1|S2|G|1639
9RPV|1|S2|A|1640
9RPV|1|S2|A|1641

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain B4

Transfer RNA; tRNA

Chain SF

40S ribosomal protein S5

Chain SQ

40S ribosomal protein S16

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19