J3_9RPV_073
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- U(OMG)GA*U(PSU)AAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 9RPV|1|S3|G|921
- QA status
- Modified nucleotides: OMG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|S3|U|682
9RPV|1|S3|OMG|683
9RPV|1|S3|G|684
9RPV|1|S3|A|685
*
9RPV|1|S3|U|917
9RPV|1|S3|PSU|918
9RPV|1|S3|A|919
9RPV|1|S3|A|920
9RPV|1|S3|G|921
9RPV|1|S3|A|922
*
9RPV|1|S3|U|1022
9RPV|1|S3|A|1023
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RH
- 40S ribosomal protein S7
- Chain RL
- 40S ribosomal protein S11
- Chain RN
- 40S ribosomal protein S13
- Chain RW
- 40S ribosomal protein S15a
- Chain RX
- 40S ribosomal protein S23
- Chain Rb
- 40S ribosomal protein S27
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