J3_9RTU_018

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9RTU|1|A|U|2833, 9RTU|1|A|A|2835, 9RTU|1|A|U|2884, 9RTU|1|A|G|2885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTU|1|A|G|2812
9RTU|1|A|A|2813
9RTU|1|A|A|2814
9RTU|1|A|C|2815
*
9RTU|1|A|G|2831
9RTU|1|A|U|2832
9RTU|1|A|U|2833
9RTU|1|A|G|2834
9RTU|1|A|A|2835
9RTU|1|A|U|2836
*
9RTU|1|A|A|2882
9RTU|1|A|A|2883
9RTU|1|A|U|2884
9RTU|1|A|G|2885
9RTU|1|A|A|2886
9RTU|1|A|A|2887
9RTU|1|A|C|2888

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22