J3_9RTV_018

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9RTV|1|A|U|2833, 9RTV|1|A|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|A|G|2812
9RTV|1|A|A|2813
9RTV|1|A|A|2814
9RTV|1|A|C|2815
*
9RTV|1|A|G|2831
9RTV|1|A|U|2832
9RTV|1|A|U|2833
9RTV|1|A|G|2834
9RTV|1|A|A|2835
9RTV|1|A|U|2836
*
9RTV|1|A|A|2882
9RTV|1|A|A|2883
9RTV|1|A|U|2884
9RTV|1|A|G|2885
9RTV|1|A|A|2886
9RTV|1|A|A|2887
9RTV|1|A|C|2888

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22