J3_9RTV_021
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 9RTV|1|a|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTV_021 not in the Motif Atlas
- Homologous match to J3_6CZR_058
- Geometric discrepancy: 0.1335
- The information below is about J3_6CZR_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.3
- Basepair signature
- cWW-cWW-cSW-cWS-tHW-cWW-cWW-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9RTV|1|a|G|46
9RTV|1|a|C|47
9RTV|1|a|C|48
9RTV|1|a|U|49
9RTV|1|a|A|50
9RTV|1|a|A|51
9RTV|1|a|C|52
*
9RTV|1|a|G|359
9RTV|1|a|G|360
9RTV|1|a|G|361
9RTV|1|a|G|362
9RTV|1|a|A|363
9RTV|1|a|A|364
9RTV|1|a|U|365
9RTV|1|a|A|366
9RTV|1|a|U|367
*
9RTV|1|a|A|393
9RTV|1|a|G|394
9RTV|1|a|C|395
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
- Chain x
- Elongation factor G
Coloring options: