J3_9RU6_002
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUA*UUGAAACCUG
- Length
- 60 nucleotides
- Bulged bases
- 9RU6|1|A|C|1699, 9RU6|1|A|U|1701, 9RU6|1|A|C|1707, 9RU6|1|A|A|1708, 9RU6|1|A|C|1715, 9RU6|1|A|U|1716, 9RU6|1|A|A|1735, 9RU6|1|A|C|1764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RU6|1|A|C|1684
9RU6|1|A|C|1685
9RU6|1|A|A|1686
9RU6|1|A|A|1687
9RU6|1|A|A|1688
9RU6|1|A|C|1689
9RU6|1|A|C|1690
9RU6|1|A|C|1691
9RU6|1|A|A|1692
9RU6|1|A|C|1693
9RU6|1|A|U|1694
9RU6|1|A|C|1695
9RU6|1|A|C|1696
9RU6|1|A|A|1697
9RU6|1|A|C|1698
9RU6|1|A|C|1699
9RU6|1|A|U|1700
9RU6|1|A|U|1701
9RU6|1|A|A|1702
9RU6|1|A|C|1703
9RU6|1|A|U|1704
9RU6|1|A|A|1705
9RU6|1|A|C|1706
9RU6|1|A|C|1707
9RU6|1|A|A|1708
9RU6|1|A|G|1709
9RU6|1|A|A|1710
9RU6|1|A|C|1711
9RU6|1|A|A|1712
9RU6|1|A|A|1713
9RU6|1|A|C|1714
9RU6|1|A|C|1715
9RU6|1|A|U|1716
9RU6|1|A|U|1717
9RU6|1|A|A|1718
9RU6|1|A|G|1719
9RU6|1|A|C|1720
9RU6|1|A|C|1721
9RU6|1|A|A|1722
*
9RU6|1|A|U|1729
9RU6|1|A|U|1730
9RU6|1|A|A|1731
9RU6|1|A|C|1732
9RU6|1|A|C|1733
9RU6|1|A|C|1734
9RU6|1|A|A|1735
9RU6|1|A|A|1736
9RU6|1|A|A|1737
9RU6|1|A|U|1738
9RU6|1|A|A|1739
*
9RU6|1|A|U|1758
9RU6|1|A|U|1759
9RU6|1|A|G|1760
9RU6|1|A|A|1761
9RU6|1|A|A|1762
9RU6|1|A|A|1763
9RU6|1|A|C|1764
9RU6|1|A|C|1765
9RU6|1|A|U|1766
9RU6|1|A|G|1767
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain U
- Large ribosomal subunit protein uL23m
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: