J3_9RU9_021
3D structure
- PDB id
- 9RU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UAUC*GU(PSU)*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 9RU9|1|L5|A|4464, 9RU9|1|L5|U|4465
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RU9|1|L5|U|4463
9RU9|1|L5|A|4464
9RU9|1|L5|U|4465
9RU9|1|L5|C|4466
*
9RU9|1|L5|G|4491
9RU9|1|L5|U|4492
9RU9|1|L5|PSU|4493
*
9RU9|1|L5|A|4507
9RU9|1|L5|C|4508
9RU9|1|L5|U|4509
9RU9|1|L5|A|4510
9RU9|1|L5|A|4511
9RU9|1|L5|U|4512
9RU9|1|L5|A|4513
Current chains
- Chain L5
- 23S rRNA
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain LO
- 60S ribosomal protein L13a
- Chain LV
- 60S ribosomal protein L23
Coloring options: