J3_9S3D_027

3D structure

PDB id

9S3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC bound human RNC with 58 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

AG*CGCAAAU*AGU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3D|1|S2|A|40
9S3D|1|S2|G|41
*
9S3D|1|S2|C|481
9S3D|1|S2|G|482
9S3D|1|S2|C|483
9S3D|1|S2|A|484
9S3D|1|S2|A|485
9S3D|1|S2|A|486
9S3D|1|S2|U|487
*
9S3D|1|S2|A|512
9S3D|1|S2|G|513
9S3D|1|S2|U|514

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain SX

40S ribosomal protein S23