J3_9S7C_006

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAGCCUG*CAACC*GCA

Length

16 nucleotides

Bulged bases

9S7C|1|A|A|2425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7C|1|A|U|2336
9S7C|1|A|A|2337
9S7C|1|A|A|2338
9S7C|1|A|G|2339
9S7C|1|A|C|2340
9S7C|1|A|C|2341
9S7C|1|A|U|2342
9S7C|1|A|G|2343
*
9S7C|1|A|C|2423
9S7C|1|A|A|2424
9S7C|1|A|A|2425
9S7C|1|A|C|2426
9S7C|1|A|C|2427
*
9S7C|1|A|G|2436
9S7C|1|A|C|2437
9S7C|1|A|A|2438

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34m

Chain 9

Large ribosomal subunit protein mL41

Chain U

Large ribosomal subunit protein uL23m

Chain s

Large ribosomal subunit protein mL65