J3_9S7D_015

3D structure

PDB id

9S7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

9S7D|1|AA|U|582, 9S7D|1|AA|C|583, 9S7D|1|AA|A|584, 9S7D|1|AA|A|585

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7D|1|AA|U|563
9S7D|1|AA|G|564
9S7D|1|AA|U|565
9S7D|1|AA|A|566
9S7D|1|AA|A|567
9S7D|1|AA|U|568
9S7D|1|AA|C|569
*
9S7D|1|AA|G|580
9S7D|1|AA|A|581
9S7D|1|AA|U|582
9S7D|1|AA|C|583
9S7D|1|AA|A|584
9S7D|1|AA|A|585
9S7D|1|AA|C|586
9S7D|1|AA|C|587
9S7D|1|AA|U|588
9S7D|1|AA|C|589
9S7D|1|AA|A|590
9S7D|1|AA|C|591
*
9S7D|1|AA|G|704
9S7D|1|AA|C|705
9S7D|1|AA|A|706
9S7D|1|AA|A|707

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AH

Small ribosomal subunit protein uS10m

Chain AK

Small ribosomal subunit protein uS14m

Chain Aw

Transfer RNA; tRNA