J3_9S7D_017

3D structure

PDB id

9S7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUUU*AAACUAC*GGUG

Length

16 nucleotides

Bulged bases

9S7D|1|AA|U|722, 9S7D|1|AA|C|738, 9S7D|1|AA|U|739

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7D|1|AA|C|719
9S7D|1|AA|A|720
9S7D|1|AA|U|721
9S7D|1|AA|U|722
9S7D|1|AA|U|723
*
9S7D|1|AA|A|735
9S7D|1|AA|A|736
9S7D|1|AA|A|737
9S7D|1|AA|C|738
9S7D|1|AA|U|739
9S7D|1|AA|A|740
9S7D|1|AA|C|741
*
9S7D|1|AA|G|771
9S7D|1|AA|G|772
9S7D|1|AA|U|773
9S7D|1|AA|G|774

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

Small ribosomal subunit protein uS7m

Chain AX

Small ribosomal subunit protein mS29