J3_9S7E_005
3D structure
- PDB id
- 9S7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AAAAUUUAACACCCAU*AUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 59 nucleotides
- Bulged bases
- 9S7E|1|A|A|2154, 9S7E|1|A|U|2158, 9S7E|1|A|C|2219, 9S7E|1|A|C|2221, 9S7E|1|A|C|2224, 9S7E|1|A|C|2225, 9S7E|1|A|U|2233, 9S7E|1|A|A|2241, 9S7E|1|A|U|2242, 9S7E|1|A|A|2243, 9S7E|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9S7E|1|A|A|2153
9S7E|1|A|A|2154
9S7E|1|A|A|2155
9S7E|1|A|A|2156
9S7E|1|A|U|2157
9S7E|1|A|U|2158
9S7E|1|A|U|2159
9S7E|1|A|A|2160
9S7E|1|A|A|2161
9S7E|1|A|C|2162
9S7E|1|A|A|2163
9S7E|1|A|C|2164
9S7E|1|A|C|2165
9S7E|1|A|C|2166
9S7E|1|A|A|2167
9S7E|1|A|U|2168
*
9S7E|1|A|A|2192
9S7E|1|A|U|2193
9S7E|1|A|U|2194
9S7E|1|A|A|2195
9S7E|1|A|A|2196
9S7E|1|A|G|2197
*
9S7E|1|A|C|2212
9S7E|1|A|A|2213
9S7E|1|A|A|2214
9S7E|1|A|C|2215
9S7E|1|A|A|2216
9S7E|1|A|C|2217
9S7E|1|A|C|2218
9S7E|1|A|C|2219
9S7E|1|A|A|2220
9S7E|1|A|C|2221
9S7E|1|A|U|2222
9S7E|1|A|A|2223
9S7E|1|A|C|2224
9S7E|1|A|C|2225
9S7E|1|A|U|2226
9S7E|1|A|A|2227
9S7E|1|A|A|2228
9S7E|1|A|A|2229
9S7E|1|A|A|2230
9S7E|1|A|A|2231
9S7E|1|A|A|2232
9S7E|1|A|U|2233
9S7E|1|A|C|2234
9S7E|1|A|C|2235
9S7E|1|A|C|2236
9S7E|1|A|A|2237
9S7E|1|A|A|2238
9S7E|1|A|A|2239
9S7E|1|A|C|2240
9S7E|1|A|A|2241
9S7E|1|A|U|2242
9S7E|1|A|A|2243
9S7E|1|A|U|2244
9S7E|1|A|A|2245
9S7E|1|A|A|2246
9S7E|1|A|C|2247
9S7E|1|A|U|2248
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL36m
- Chain E
- Large ribosomal subunit protein uL3m
- Chain I
- Large ribosomal subunit protein uL10m
- Chain J
- Large ribosomal subunit protein uL11m
- Chain K
- Large ribosomal subunit protein uL13m
- Chain N
- Large ribosomal subunit protein uL16m
- Chain R
- Large ribosomal subunit protein bL20m
- Chain S
- Large ribosomal subunit protein bL21m
- Chain j
- Large ribosomal subunit protein mL52
- Chain k
- Large ribosomal subunit protein mL53
- Chain l
- Large ribosomal subunit protein mL54
- Chain o
- Large ribosomal subunit protein mL63
- Chain r
- Large ribosomal subunit protein mL66
Coloring options: