J3_9SRA_020
3D structure
- PDB id
- 9SRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- (4AC)G*CGA(A2M)ACC*GGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4AC, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRA|1|2|4AC|53
9SRA|1|2|G|54
*
9SRA|1|2|C|370
9SRA|1|2|G|371
9SRA|1|2|A|372
9SRA|1|2|A2M|373
9SRA|1|2|A|374
9SRA|1|2|C|375
9SRA|1|2|C|376
*
9SRA|1|2|G|402
9SRA|1|2|G|403
9SRA|1|2|G|404
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain AD
- 30S ribosomal protein S4
- Chain AN
- 30S ribosomal protein S12
Coloring options: