J3_9SRA_033
3D structure
- PDB id
- 9SRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGC*GGACUGC*GAGGAAGGGG
- Length
- 20 nucleotides
- Bulged bases
- 9SRA|1|2|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRA|1|2|C|1081
9SRA|1|2|G|1082
9SRA|1|2|C|1083
*
9SRA|1|2|G|1129
9SRA|1|2|G|1130
9SRA|1|2|A|1131
9SRA|1|2|C|1132
9SRA|1|2|U|1133
9SRA|1|2|G|1134
9SRA|1|2|C|1135
*
9SRA|1|2|G|1149
9SRA|1|2|A|1150
9SRA|1|2|G|1151
9SRA|1|2|G|1152
9SRA|1|2|A|1153
9SRA|1|2|A|1154
9SRA|1|2|G|1155
9SRA|1|2|G|1156
9SRA|1|2|G|1157
9SRA|1|2|G|1158
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain AH
- 30S ribosomal protein S7
- Chain AK
- 30S ribosomal protein S9
- Chain AL
- 30S ribosomal protein S10
- Chain AP
- 30S ribosomal protein S14 type Z
- Chain AS
- 30S ribosomal protein S17e
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