J3_9SRA_034
3D structure
- PDB id
- 9SRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CAAUG*CUCAGUUC*GCUG
- Length
- 17 nucleotides
- Bulged bases
- 9SRA|1|2|U|1214, 9SRA|1|2|U|1276
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRA|1|2|C|1211
9SRA|1|2|A|1212
9SRA|1|2|A|1213
9SRA|1|2|U|1214
9SRA|1|2|G|1215
*
9SRA|1|2|C|1270
9SRA|1|2|U|1271
9SRA|1|2|C|1272
9SRA|1|2|A|1273
9SRA|1|2|G|1274
9SRA|1|2|U|1275
9SRA|1|2|U|1276
9SRA|1|2|C|1277
*
9SRA|1|2|G|1308
9SRA|1|2|C|1309
9SRA|1|2|U|1310
9SRA|1|2|G|1311
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain AH
- 30S ribosomal protein S7
- Chain AO
- 30S ribosomal protein S13
- Chain AU
- 30S ribosomal protein S19e
Coloring options: