J3_9SRB_010
3D structure
- PDB id
- 9SRB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GCGGGGA*UUUAAAGAGUG*CUCACCCGU
- Length
- 27 nucleotides
- Bulged bases
- 9SRB|1|1|A|1343, 9SRB|1|1|G|1362
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRB|1|1|G|1306
9SRB|1|1|C|1307
9SRB|1|1|G|1308
9SRB|1|1|G|1309
9SRB|1|1|G|1310
9SRB|1|1|G|1311
9SRB|1|1|A|1312
*
9SRB|1|1|U|1336
9SRB|1|1|U|1337
9SRB|1|1|U|1338
9SRB|1|1|A|1339
9SRB|1|1|A|1340
9SRB|1|1|A|1341
9SRB|1|1|G|1342
9SRB|1|1|A|1343
9SRB|1|1|G|1344
9SRB|1|1|U|1345
9SRB|1|1|G|1346
*
9SRB|1|1|C|1355
9SRB|1|1|U|1356
9SRB|1|1|C|1357
9SRB|1|1|A|1358
9SRB|1|1|C|1359
9SRB|1|1|C|1360
9SRB|1|1|C|1361
9SRB|1|1|G|1362
9SRB|1|1|U|1363
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BF
- Large ribosomal subunit protein uL6
- Chain Bg
- Large ribosomal subunit protein eL40
Coloring options: