J3_9SRE_031
3D structure
- PDB id
- 9SRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- UA(OMC)*GCGUC*GUAA
- Length
- 12 nucleotides
- Bulged bases
- 9SRE|1|2|A|1066
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRE|1|2|U|1038
9SRE|1|2|A|1039
9SRE|1|2|OMC|1040
*
9SRE|1|2|G|1047
9SRE|1|2|C|1048
9SRE|1|2|G|1049
9SRE|1|2|U|1050
9SRE|1|2|C|1051
*
9SRE|1|2|G|1064
9SRE|1|2|U|1065
9SRE|1|2|A|1066
9SRE|1|2|A|1067
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AF
- 30S ribosomal protein S5
Coloring options: