J3_9SYH_002

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

GCCUAAC*GGGGAAUAU*AGC

Length

19 nucleotides

Bulged bases

9SYH|1|A|C|48, 9SYH|1|A|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|A|G|46
9SYH|1|A|C|47
9SYH|1|A|C|48
9SYH|1|A|U|49
9SYH|1|A|A|50
9SYH|1|A|A|51
9SYH|1|A|C|52
*
9SYH|1|A|G|359
9SYH|1|A|G|360
9SYH|1|A|G|361
9SYH|1|A|G|362
9SYH|1|A|A|363
9SYH|1|A|A|364
9SYH|1|A|U|365
9SYH|1|A|A|366
9SYH|1|A|U|367
*
9SYH|1|A|A|393
9SYH|1|A|G|394
9SYH|1|A|C|395

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain P

Small ribosomal subunit protein bS16