J3_9SYH_008

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|A|U|943
9SYH|1|A|G|944
9SYH|1|A|G|945
9SYH|1|A|A|946
*
9SYH|1|A|U|1235
9SYH|1|A|A|1236
9SYH|1|A|C|1237
*
9SYH|1|A|G|1337
9SYH|1|A|G|1338
9SYH|1|A|A|1339
9SYH|1|A|A|1340

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain I

Small ribosomal subunit protein uS9

Chain M

Small ribosomal subunit protein uS13

Chain Z

Transfer RNA; tRNA